Wednesday, July 11, 2012

STPM Biology - chapter 1: Revision essay question 5


5.  Describe the Structure of the Peptide Bond

Answer: 

X-ray diffraction studies of crystals of small peptides by Linus Pauling and R. B. Corey indicated that the peptide bond is rigid, and planer. Pauling pointed out that this is largely a consequence of the resonance interaction of the amide, or the ability of the amide nitrogen to delocalize its lone pair of electrons onto the carbonyl oxygen.
Because of this resonance, the C=O bond is actually longer than normal carbonyl bonds, and the N–C bond of the peptide bond is shorter than the N–Cα bond. Notice that the carbonyl oxygen and amide hydrogen are in a trans configuration, as opposed to a cis configuration. This configuration is energetically more favorable because of possible stearic interactions in the other.

Assignment submitted by L.Y., Kong,  S. H., Lim, S. C., Soo, C. W. Tan and C.C.,Teh 2011/2012 (IBM)

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